Quick Start Guide
- Navigate to the Dashboard and go to the "Pan-Genome Comparison" tab.
- Click "Choose File" and select your FASTA file.
- Optionally fill in organism name, strain, and description.
- Click "Upload Genome" and wait for the confirmation message.
Supported formats: .fasta, .fa, .fna — Maximum file size: 20 MB
Supported File Formats
Input Formats
- .fasta — Standard FASTA format
- .fa — FASTA short form
- .fna — Nucleotide FASTA
Maximum file size: 20 MB
Output Formats
- .fasta — Gene sequences (Core, Accessory, Unique)
- .xlsx — Excel annotations with COG categories
- .png — COG classification charts
- .txt — Summary statistics and mapping logs
Tutorial Guide (PDF)
Download the comprehensive tutorial with screenshots and step-by-step walkthroughs for every feature.
Troubleshooting
Tips & Best Practices
Best Practices
- Use properly formatted FASTA files.
- Include organism name for better results tracking.
- Ensure sequences are complete and valid.
- Select appropriate species for comparison.
- Save Comparison IDs for checking results later.
Pro Tips
- Start with smaller genomes for testing.
- Use descriptive strain names for easy tracking.
- Download results immediately after completion.
- Check COG categories for functional insights.